Neurobiotin protocol and chemicals

Source: Otto Friesen’s lab (with small revisions from Bill Kristan’s lab (6/13/95)

CHEMICALS & SUPPLIERS

Neurobiotin, Sold as Neurobiotin tracer
Cat No. SP-1120
Price: $45 / 50 mg
Vector Labs, Inc.
30 Ingold Rd
Burlingame, CA 94010
(415) 697 0339
(800) 227 6606

Anti-biotin Jackson Immunoresearch Labs, Inc.
Cy3-conjugated IgG fraction
Monoclonal mouse anti-biotin
Cat No. 200-162-0960
Price: $114 / 0.5 mg
872 West Baltimore Pike
P.O. Box 9
West Grove, PA 19390
(800) 367- 5296

Paraformaldehide
Cat No. P-6184
Price: $11.85 / 500 g)
Sigma Chemical Co.
P.O. Box 12508
St. Louis, MO 63178
(800) 325 3010

Goat Serum
Cat No: ?-6898
Price: $20 / 100 ml
Potassium acetate (Kac) Sigma ACS reagent KAc
Cat. No. P-1147
Price: $ 16 / 500g crystalline
Sigma

Triton X-100
SigmaUltra Triton X-100
Cat No. G-7893
Price: $ 24 / 100 ml
Sigma

Glycerol
ACS reagent glycerol
Cat no. G-7893
Price: $ 19.80 / 500 ml
Sigma

Sodium bicarbonate
ACS reagent sodium bicarbonate
Cat no: S-6014
Price: $ 11.70 / 500 g
Sodium phosphate dibasic, Na2HPO4 (heptahydrate)
Sodium phosphate monobasic, NaH2PO4 (monohydrate)
Sigma

Vectashield mounting medium (optional) Vector Labs. Inc
Cat No. H-1000
Price: $ 40 / 10 ml bottle

OTHER SUPPLIES

Glass slides

Long cover slips

Parafilm

Small vials for frozen antibody aliquots and for neurobiotin solutions

10 ml tubes for storing frozen goat serum

Large Petri dishes and covers for storing slides with mounted preparations

Fingernail polish

STOCK SOLUTIONS

Solution A 0.1 M Na2HPO4. Make 4 vols

Solution B 0.1 M Na2H2PO4. Make 1 vol.

 

PB 0.1 M phosphate buffer (combine solutions A and B in a ratio of 4:1; adjust pH to 7.3 to 7.4 by adding additional A or B). Make 1 lt

PBX 0.1 M phosphate buffer with 0.3% Triton X-100 (make up five 50 ml bottles)

Goat Serum Comes as frozen liquid; make aliquots of about 5 ml before freezing

PBXG 0.1 M phosphate buffer with 0.3% Triton X-100 and 10% goat serum (make up five 50 ml bottles)

KAc 2 M solution for intracellular electrodes (100 ml)

Neurobiotin 4% Neurobiotin in 2 M KAc (4.7 mg neurobiotin in 100 :l of 2 M Kac)

Glycerol For mounting. 80% glycerol with 20 mM sodium bicarbonate in dH2O

FRESH SOLUTIONS (made up fresh for each use)

Antibody Cy3-conjugated IgG fraction monoclonal mouse anti-biotin dilute 1:2000 in PBXG. Comes as a freeze dried powder. Upon arrival dissolve in 0.4 ml dH2O. Let stand for 1 hr or use gentle vortexing. Solution should be clear. Store frozen in 10:l aliquots.

Paraformaldehyde: 4% solution (see separate protocol for paraformaldehyde preparation). Make two 100 ml bottles

PROTOCOL

1. Backfill microelectrodes with 4% neurobiotin in 2 M Kac. Place electrodes upside down (point upward) into vial containing the neurobiotin; wait ~10 min, then verify that the tip has filled by looking for a meniscus near the electrode shank under a dissecting scope.

2. Inject neurobiotin into cells with 0. S duration, +3-4nA current pulses, repeating every 1 sec for about ½ hour. Clogging of the electrodes is reduced by applying a continuous negative current of about -0.1 nA while applying the current pulses.

3. Leave the preparation undisturbed for 1 hr to allow neurobiotin to diffuse to the processes of the injected neuron.

4. Fix the ganglion with the 4% paraformaldehyde solution for at leats 4 hrs (overnight is better). Keep dish covered, paraformaldehyde is nasty!!

5. Rinse 6 times (1 hr between rinses at 4oC or ½ hr at room temp) with PBX solution, changing the solution twice during each rinse. This is done with the prep still pinned in the dish. For the final rinse, use the PBXG solution.

6. Remove the PBXG solution and apply the antibody solution. Place on a tilt table to provide continuous, gentle agitation for at least 4 hrs (or overnight) at 4oC.

7. Rinse preparation 6 times during the course of 1 hr with PB solution. Place on tilt table between rinses.

8. To mount the preparation make a spacer of a single layer of parafilm around the edge of the glass slide. One easy way of doing this is to cut a square of parafilm the size of a cover slip. Then cut the center of the parafilm to leave a narrow border, which can be place on the glass slide. The parafilm serves as a spacer to prevent the cover slip from squashing the preparation. Transfer the preparation from the dish to the slide. Add the glycerol mounting medium. Place the cover slip over the preparation and paint the edges with nail polish to seal the edges.

9. View the injected cells with fluorescence microscope using the filters used to view rhodamine.

 
Copyright: STG Lab 2006
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Last Modified:March 06, 2009